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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20287590_20287714_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20287590 - 20287714

Intron Length:

125

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

CTCTCCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

CTCTGCCCACCT

Flanking Amino Acid:

ATCYAHLYVTDVVPTPPDGP

Intron Amino Acid Position:

1322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

66.7

39.6

Major BPS

59.9

0.25

1.3

70.1

Major PPT

75.4

0.57

0.8

69.7

29.9

Minor 5ss

31.1

-2.2

3.4

34.1

42.2

Minor BPS

40.3

-0.6

2.3

60.29

48.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543