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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20288647_20289330_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20288647 - 20289330

Intron Length:

684

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTCGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

CACGCCCCATTT

Flanking Amino Acid:

ARCTLRLRLAEAPRFESIME

Intron Amino Acid Position:

1525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

77.2

32.8

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

73.4

0.53

69.7

36.3

Minor 5ss

32.6

-2

3.4

44.1

43.8

Minor BPS

38.8

-0.7

49.54

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543