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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20291176_20291359_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20291176 - 20291359

Intron Length:

184

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

GTCCCAGTGACC

Flanking Amino Acid:

IWPVGVIAYLCLTGISPFVG

Intron Amino Acid Position:

1830

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

73.9

0.54

0.7

67.9

25.5

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

44.6

-0.4

2.2

57.37

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543