Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20296553_20296636_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20296553 - 20296636

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CCCGGTGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAACAT

U12 Branch Point Sequence:

GGGGGCTGAGCA

Flanking Amino Acid:

KPYTFLDEKARGRFGVIRLC

Intron Amino Acid Position:

3113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

54.4

0.11

61.4

34.3

Major PPT

64.7

0.33

56.6

38.8

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

40.3

-0.7

45.7

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027821

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034203

20265730 - 20297272

31543