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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20308149_20308232_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20308149 - 20308232

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CCCCTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

CCCCTCTCAGCC

Flanking Amino Acid:

AAQQEFKIPIRYLQEYAALG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

58.6

0.22

1.5

38.9

Major PPT

67.4

0.39

0.8

60.5

29.4

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

44.2

-0.4

1.7

47.1

42.5

Associated Gene:

Gene:

GMPPA

Ensembl Gene ID:

ENSAPLG00000023767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037898

20307273 - 20310506

3234

ENSAPLT00000045820

20307273 - 20311114

3842