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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20308939_20309449_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20308939 - 20309449

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTCTCGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

GGGGGCTGACGG

Flanking Amino Acid:

QQELALCPYLGEESSNGWQR

Intron Amino Acid Position:

215

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.7

44.5

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

71.6

0.49

0.8

65.1

30.6

Minor 5ss

37.4

-1.4

42.1

44.4

Minor BPS

32.7

-1.4

2.1

41.4

Associated Gene:

Gene:

GMPPA

Ensembl Gene ID:

ENSAPLG00000023767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037898

20307273 - 20310506

3234