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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20313404_20313506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20313404 - 20313506

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CTCCCCTCACCT

Flanking Amino Acid:

RARQHAWPREGVLADFAPPT

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

39.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

77.7

0.62

0.8

69.9

36.6

Minor 5ss

24.1

-3

3.2

29.4

43.5

Minor BPS

50.4

0.09

1.9

69.41

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036116

20311097 - 20316038

4942