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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20313911_20314086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20313911 - 20314086

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCATGGAT

5'SS Class:

major

3'SS Sequence:

CCTCTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCTAT

U12 Branch Point Sequence:

GTCCCCTCCACT

Flanking Amino Acid:

RQGHRVSTRAEPATAWGTSE

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.8

0.37

1.3

65.9

39.9

Major BPS

53.6

0.09

1.4

52.4

44.8

Major PPT

82.1

0.72

0.7

76.4

25.6

Minor 5ss

26.4

-2.7

3.4

38.3

46.6

Minor BPS

49.9

0.08

70.65

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023193

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036116

20311097 - 20316038

4942