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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20354454_20354828_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20354454 - 20354828

Intron Length:

375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

GGTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAC

U12 Branch Point Sequence:

TGGGTGGTGACC

Flanking Amino Acid:

RKYNKNETYIRENFLVLDIF

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

56.2

0.15

1.3

48.8

46.3

Major PPT

66.5

0.37

0.9

58.7

38.3

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

38.4

-0.9

2.5

48.9

42.1

Associated Gene:

Gene:

ASIC4

Ensembl Gene ID:

ENSAPLG00000020592

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042794

20336627 - 20357327

20701