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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20387685_20387917_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20387685 - 20387917

Intron Length:

233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGGGCC

5'SS Class:

major

3'SS Sequence:

CCATGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGCCAT

U12 Branch Point Sequence:

CTGCAGCCAACG

Flanking Amino Acid:

SQTSSQLRVKCVKRDPPSAP

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.2

62.7

37.5

Major BPS

45.3

-0.2

1.4

49.9

45.3

Major PPT

71.4

0.48

64.4

41.2

Minor 5ss

32.5

-2

3.6

43.1

44.2

Minor BPS

34.1

-1.3

2.3

38.81

43.8

Associated Gene:

Gene:

OBSL1

Ensembl Gene ID:

ENSAPLG00000020759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037623

20377097 - 20390177

13081