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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20388550_20389106_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20388550 - 20389106

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGCG

5'SS Class:

major

3'SS Sequence:

CTCCCGGCGGCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

GGGTGCTCAGCG

Flanking Amino Acid:

TLSAVQLRVKEHRVRFQVQL

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

1.1

61.3

42.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

58.5

0.19

36.7

Minor 5ss

31.2

-2.2

3.3

32.4

42.3

Minor BPS

42.2

-0.7

2.1

45.34

46.4

Associated Gene:

Gene:

OBSL1

Ensembl Gene ID:

ENSAPLG00000020759

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037623

20377097 - 20390177

13081