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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20408059_20408525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20408059 - 20408525

Intron Length:

467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGGAG

5'SS Class:

major

3'SS Sequence:

TCTCCTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTAAA

U12 Branch Point Sequence:

AGAGCTTAAAGT

Flanking Amino Acid:

FFYLLAYLIQEYSTQNRTQF

Intron Amino Acid Position:

1088

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.1

57.4

41.7

Major BPS

0.25

1.3

63.9

40.2

Major PPT

85.2

0.79

0.6

84.3

23.5

Minor 5ss

26.8

-2.7

3.7

36.9

47.7

Minor BPS

45.6

-0.2

59.31

44.2

Associated Gene:

Gene:

STK11IP

Ensembl Gene ID:

ENSAPLG00000003429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003552

20407991 - 20427634

19644