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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20409840_20410028_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20409840 - 20410028

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

AGCGCTGTCACT

Flanking Amino Acid:

NNEEFQCFLKVAMVKFGRQG

Intron Amino Acid Position:

940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

71.9

34.5

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

70.1

0.45

0.9

61.5

40.1

Minor 5ss

39.7

-1.2

2.9

50.9

45.8

Minor BPS

-0.5

2.3

57.97

45.4

Associated Gene:

Gene:

STK11IP

Ensembl Gene ID:

ENSAPLG00000003429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003552

20407991 - 20427634

19644