Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20411419_20412914_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20411419 - 20412914

Intron Length:

1496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

AAATCTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TTTTCTGTATCC

Flanking Amino Acid:

SLETLVASNQDAAAGGEPIA

Intron Amino Acid Position:

736

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

82.1

0.8

71.6

36.4

Major PPT

68.9

0.43

0.9

61.9

38.8

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

57.3

0.21

2.2

77.75

38.7

Associated Gene:

Gene:

STK11IP

Ensembl Gene ID:

ENSAPLG00000003429

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003552

20407991 - 20427634

19644