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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20445734_20446699_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20445734 - 20446699

Intron Length:

966

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCACAC

U12 Branch Point Sequence:

TGCACACTAGGA

Flanking Amino Acid:

LLELRKTIAHGAVLLDLEQT

Intron Amino Acid Position:

411

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

66.7

40.4

Major BPS

52.6

0.07

1.1

60.7

37.6

Major PPT

68.8

0.42

64.5

36.5

Minor 5ss

28.3

-2.5

2.7

37.1

Minor BPS

37.4

-0.9

2.1

47.01

42.2

Associated Gene:

Gene:

SLC4A3

Ensembl Gene ID:

ENSAPLG00000003772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003919

20432792 - 20461201

28410