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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20446836_20447011_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20446836 - 20447011

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCGTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAG

U12 Branch Point Sequence:

AGCAGGATAATG

Flanking Amino Acid:

NVLRALLLKHSHPNDEKEGF

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

68.4

38.7

Major BPS

52.9

0.07

1.6

51.7

43.9

Major PPT

70.4

0.46

0.8

61.1

35.1

Minor 5ss

25.2

-2.9

3.2

43.6

Minor BPS

34.8

-1.2

2.3

35.81

39.6

Associated Gene:

Gene:

SLC4A3

Ensembl Gene ID:

ENSAPLG00000003772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003919

20432792 - 20461201

28410