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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20452440_20452860_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20452440 - 20452860

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATGGGC

5'SS Class:

major

3'SS Sequence:

TTCTCTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

CTGTCTGTAACA

Flanking Amino Acid:

SPAITFGGLLGEKTEGLMGV

Intron Amino Acid Position:

754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

65.1

40.9

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

86.4

0.82

0.7

Minor 5ss

29.6

-2.3

3.5

41.6

45.1

Minor BPS

58.5

0.26

2.1

70.38

42.6

Associated Gene:

Gene:

SLC4A3

Ensembl Gene ID:

ENSAPLG00000003772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003919

20432792 - 20461201

28410