Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20456898_20457299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20456898 - 20457299

Intron Length:

402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

TCTTTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACAAAC

U12 Branch Point Sequence:

CTGACACAAACT

Flanking Amino Acid:

ILIFMETQITTLIVSKKERK

Intron Amino Acid Position:

1023

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.2

74.9

35.3

Major BPS

48.9

-0

0.9

54.6

27.1

Major PPT

87.2

0.84

0.7

80.5

31.5

Minor 5ss

32.9

-1.9

2.6

37.5

32.2

Minor BPS

43.1

-0.4

2.2

62.52

46.9

Associated Gene:

Gene:

SLC4A3

Ensembl Gene ID:

ENSAPLG00000003772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003919

20432792 - 20461201

28410