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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20458653_20459392_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20458653 - 20459392

Intron Length:

740

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCC|GTAAGCAGA

5'SS Class:

major

3'SS Sequence:

TGTCTCTCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAA

U12 Branch Point Sequence:

TGGCCCTCAAAG

Flanking Amino Acid:

RFFHDRELKALDSEDAEPNF

Intron Amino Acid Position:

1223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.4

60.2

46.2

Major BPS

60.8

0.27

1.1

63.2

34.1

Major PPT

77.8

0.63

0.8

69.6

36.7

Minor 5ss

40.6

-1

2.9

53.3

43.9

Minor BPS

-0.1

1.8

55.83

44.6

Associated Gene:

Gene:

SLC4A3

Ensembl Gene ID:

ENSAPLG00000003772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003919

20432792 - 20461201

28410