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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20478928_20482986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20478928 - 20482986

Intron Length:

4059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CCAGGTGTTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TTCTCCCCATTC

Flanking Amino Acid:

NVLFTSDYGTCPKASLSREK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

72.8

38.8

Major BPS

79.1

0.72

69.3

38.4

Major PPT

64.1

0.32

1.1

53.1

45.7

Minor 5ss

32.5

-2

3.2

40.9

45.4

Minor BPS

46.9

-0.2

2.1

63.2

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869