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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20483137_20487205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20483137 - 20487205

Intron Length:

4069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTTAT

U12 Branch Point Sequence:

TATTTCTTTGCT

Flanking Amino Acid:

HQRYQQGNIYTNIGSILASV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

66.1

0.4

1.3

59.6

46.8

Major PPT

79.3

0.66

0.7

78.3

23.6

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

45.8

-0.2

3.6

80.69

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869