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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20490423_20492057_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20490423 - 20492057

Intron Length:

1635

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCCCACACG

5'SS Class:

weak_major

3'SS Sequence:

TTTCAGAACAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCAGAA

U12 Branch Point Sequence:

TGTTTCAGAACA

Flanking Amino Acid:

RVTDCILFFSVVHQNPGERN

Intron Amino Acid Position:

225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.8

0.02

1.2

47.2

42.3

Major BPS

64.9

0.37

37.5

Major PPT

47.4

-0.1

1.7

50.8

41.6

Minor 5ss

23.2

-3.1

3.8

29.1

37.8

Minor BPS

59.1

0.28

1.7

74.11

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869