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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20494788_20495614_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20494788 - 20495614

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTTATTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

TCTTTCTTATTA

Flanking Amino Acid:

AGGAQITTKAVLNIASDLLG

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

74.7

35.6

Major BPS

53.6

0.09

59.9

32.5

Major PPT

81.1

0.7

0.8

82.2

28.1

Minor 5ss

31.4

-2.1

3.2

39.6

46.4

Minor BPS

66.9

0.53

1.5

74.26

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869