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Intron Name: Anas_platyrhynchos_platyrhynchos_7_205056_205488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

205056 - 205488

Intron Length:

433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTGCT

5'SS Class:

major

3'SS Sequence:

TATCTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

TCTTAGTAAACA

Flanking Amino Acid:

EIFCLTTFPVRVEDEEQTRV

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.2

71.5

38.6

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

0.83

0.7

85.2

29.2

Minor 5ss

-0.3

2.9

68.1

42.9

Minor BPS

47.8

-0.1

2.5

67.79

44.7

Associated Gene:

Gene:

NIF3L1

Ensembl Gene ID:

ENSAPLG00000015875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016559

204878 - 206809

1932