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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20506731_20507513_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20506731 - 20507513

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGAAGGTACCAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TGATACTTAGGT

Flanking Amino Acid:

IRRLFQDFLSSSSDNSKAVC

Intron Amino Acid Position:

634

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

80.7

31.6

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

-0.1

1.2

37.8

43.5

Minor 5ss

35.4

-1.7

3.2

50.9

45.5

Minor BPS

49.6

0.05

71.01

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869