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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20507602_20512842_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20507602 - 20512842

Intron Length:

5241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTCAT

5'SS Class:

major

3'SS Sequence:

CCCGCGGCGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GTTTATTGAAAC

Flanking Amino Acid:

KKEWQLGKTKVFLKEALEQK

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

40.8

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

52.6

0.06

1.1

49.1

39.3

Minor 5ss

34.9

-1.7

3.2

50.2

Minor BPS

52.6

0.06

1.7

66.74

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869