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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20524024_20526085_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20524024 - 20526085

Intron Length:

2062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAATC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACCCAA

U12 Branch Point Sequence:

GTAGCCAGGATT

Flanking Amino Acid:

LDSNRGSLDSFLDSEEEVDV

Intron Amino Acid Position:

1035

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

79.3

34.5

Major BPS

45.1

-0.3

1.3

50.4

36.7

Major PPT

86.7

0.82

0.6

85.4

21.9

Minor 5ss

38.5

-1.3

3.1

53.9

43.1

Minor BPS

45.5

-0.2

1.8

62.39

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869