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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20526934_20527718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20526934 - 20527718

Intron Length:

785

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TGTCTTGTAATT

Flanking Amino Acid:

LKGTIDIRRAKEIVDIHEKE

Intron Amino Acid Position:

1157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

71.2

34.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

75.5

0.57

44.2

Minor 5ss

28.3

-2.5

3.1

31.3

36.6

Minor BPS

51.6

0.13

73.2

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869