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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20531849_20533623_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20531849 - 20533623

Intron Length:

1775

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGGA

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTCCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

AGCCACTGAGAT

Flanking Amino Acid:

KVDGQEFLVRGWLHKEVQSS

Intron Amino Acid Position:

1287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.5

36.7

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

72.5

0.51

0.8

70.3

30.7

Minor 5ss

29.1

-2.4

3.4

38.8

46.3

Minor BPS

40.9

-0.6

1.8

52.65

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869