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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20533819_20535031_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20533819 - 20535031

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

GCAACTTTCACC

Flanking Amino Acid:

QPDERVFKDTGYWNIIVHGR

Intron Amino Acid Position:

1352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

77.7

0.69

30.2

Major PPT

79.9

0.67

0.9

37.4

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

49.3

-0

1.8

56.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869