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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20544567_20545625_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20544567 - 20545625

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGTGCTTATCC

Flanking Amino Acid:

EREMFFETSQVGEIIKIMKA

Intron Amino Acid Position:

1916

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.77

0.8

77.1

37.1

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

55.4

0.15

68.47

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004797

20478871 - 20545739

66869