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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20560420_20560834_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20560420 - 20560834

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

ATATTTTTCACA

Flanking Amino Acid:

VWLGVIYDDSDKVLKWYDET

Intron Amino Acid Position:

1322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

81.5

0.71

0.8

76.5

36.8

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

58.7

0.27

1.7

69.76

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005854

20553853 - 20598781

44929