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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20562037_20563145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20562037 - 20563145

Intron Length:

1109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTATG

5'SS Class:

major

3'SS Sequence:

TTTCCTTATTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCCTTATTT

Flanking Amino Acid:

NRGVICYSSEKKNEKEQVTQ

Intron Amino Acid Position:

1227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

77.2

37.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.8

81.8

Minor 5ss

47.1

-0.3

2.5

59.8

38.9

Minor BPS

81.5

1.07

1.4

95.91

30.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005854

20553853 - 20598781

44929