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Intron Name: Anas_platyrhynchos_platyrhynchos_7_205655_206385_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

205655 - 206385

Intron Length:

731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGATTC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

ACTCTCTAAAGC

Flanking Amino Acid:

GINNWLTKGLGACNSVPLHP

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

73.8

30.9

Major BPS

0.57

73.6

28.6

Major PPT

78.7

0.65

0.9

76.2

37.8

Minor 5ss

37.2

-1.4

3.2

47.6

42.6

Minor BPS

47.6

-0.2

1.9

57.18

41.8

Associated Gene:

Gene:

NIF3L1

Ensembl Gene ID:

ENSAPLG00000015875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016559

204878 - 206809

1932