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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20574754_20575018_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20574754 - 20575018

Intron Length:

265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTGTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

GATTTCTTACGC

Flanking Amino Acid:

TPKTPEWYVPDEIGIHGAPL

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.8

35.6

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

79.7

0.67

0.8

76.3

32.5

Minor 5ss

31.4

-2.1

3.2

40.8

45.4

Minor BPS

0.04

1.9

63.62

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005854

20553853 - 20598781

44929