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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20586199_20586546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20586199 - 20586546

Intron Length:

348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGAATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

AATCTGTGAATT

Flanking Amino Acid:

GSQCNLTVTNRFEQEFINSL

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

77.3

0.68

81.5

Major PPT

75.1

0.56

70.3

44.5

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

46.7

-0.1

2.1

65.68

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005854

20553853 - 20598781

44929