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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20596472_20598696_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20596472 - 20598696

Intron Length:

2225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCTACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATACTCTTACAT

Flanking Amino Acid:

VCCAARRDPAGNNAFTIRHD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

63.6

48.1

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

0.54

0.9

66.2

39.8

Minor 5ss

37.3

-1.4

47.7

47.8

Minor BPS

52.2

0.15

1.7

69.9

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005854

20553853 - 20598781

44929