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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20622882_20623553_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20622882 - 20623553

Intron Length:

672

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GATTCTATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AGTTTTCTAACT

Flanking Amino Acid:

KKGFVCKMDADIDATAPSEK

Intron Amino Acid Position:

1354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

78.3

0.64

0.9

74.5

39.7

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

62.9

0.48

1.6

79.48

36.2

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047888

20622424 - 20660194

37771

ENSAPLT00000006562

20622424 - 20662599

40176