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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20623731_20624166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20623731 - 20624166

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TGATTTATAACT

Flanking Amino Acid:

VWLNILHVTDNETVSWSDGS

Intron Amino Acid Position:

1295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

83.4

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

72.1

0.5

0.8

69.8

Minor 5ss

-0.2

2.8

68.9

36.6

Minor BPS

62.4

0.47

1.6

78.23

37.7

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047888

20622424 - 20660194

37771

ENSAPLT00000006562

20622424 - 20662599

40176