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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20626839_20628691_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20626839 - 20628691

Intron Length:

1853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTATAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

CTGTTTATAACA

Flanking Amino Acid:

NYGFVCQKKQDTSRHVINAS

Intron Amino Acid Position:

1073

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

0.82

0.8

24.9

Major PPT

74.3

0.55

70.2

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

57.8

0.24

1.6

67.13

39.9

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006562

20622424 - 20662599

40176

ENSAPLT00000047888

20622424 - 20660194

37771