Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20636393_20636918_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20636393 - 20636918

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGAAAA

5'SS Class:

major

3'SS Sequence:

GCTCGTTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATGCCTGCACA

Flanking Amino Acid:

KPKNPDWYIAELPWSYYQGA

Intron Amino Acid Position:

785

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

71.3

33.5

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

73.8

0.54

0.9

65.1

41.2

Minor 5ss

-1.2

2.8

45.4

Minor BPS

52.6

0.08

69.48

42.6

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047888

20622424 - 20660194

37771

ENSAPLT00000006562

20622424 - 20662599

40176