Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_20637527_20638479_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20637527 - 20638479

Intron Length:

953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAATACA

5'SS Class:

major

3'SS Sequence:

GTGCTGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTCCCTTAAAA

Flanking Amino Acid:

GTWQWSDRTPVVSSFLESKY

Intron Amino Acid Position:

729

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.4

0.39

1.1

67.3

37.6

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.4

0.57

68.1

42.3

Minor 5ss

38.3

-1.3

2.9

53.2

43.5

Minor BPS

80.4

0.95

1.2

86.76

30.7

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047888

20622424 - 20660194

37771

ENSAPLT00000006562

20622424 - 20662599

40176