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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20642829_20647021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20642829 - 20647021

Intron Length:

4193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAG

5'SS Class:

strong_major

3'SS Sequence:

CATTTCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

ATTTCTTTAAAG

Flanking Amino Acid:

SSEMESSCPEGWERHGGYCY

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

38.2

Major BPS

0.75

78.6

Major PPT

74.5

0.55

74.7

33.7

Minor 5ss

28.6

-2.5

3.5

36.8

47.7

Minor BPS

73.9

0.61

1.4

75.14

36.5

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047888

20622424 - 20660194

37771

ENSAPLT00000006562

20622424 - 20662599

40176