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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20647130_20648535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20647130 - 20648535

Intron Length:

1406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTTTT

5'SS Class:

major

3'SS Sequence:

TCCTCCCCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGAGAA

U12 Branch Point Sequence:

ATGTAGAGAACA

Flanking Amino Acid:

GQLCVSAQGPEGHWKVKKCE

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

1.1

81.2

33.5

Major BPS

48.8

-0

1.1

44.7

38.7

Major PPT

0.58

0.7

73.2

Minor 5ss

-0.1

2.8

77.2

37.5

Minor BPS

41.1

-0.6

2.4

56.93

41.7

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047888

20622424 - 20660194

37771

ENSAPLT00000006562

20622424 - 20662599

40176