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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20648694_20649845_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20648694 - 20649845

Intron Length:

1152

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TATTCTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TATTCTTTTACA

Flanking Amino Acid:

AELLRNLLERENVTETWIGL

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

85.7

25.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

89.3

0.88

0.7

30.6

Minor 5ss

40.8

-1

43.6

Minor BPS

72.3

0.7

1.5

80.29

35.7

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047888

20622424 - 20660194

37771

ENSAPLT00000006562

20622424 - 20662599

40176