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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20650035_20650985_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20650035 - 20650985

Intron Length:

951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

GGTTAATTAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TATACTCTAACC

Flanking Amino Acid:

YLSKTEHETFDTWKYYATRC

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

27.7

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

54.4

0.1

1.2

53.7

Minor 5ss

40.4

-1.1

2.8

51.7

39.2

Minor BPS

62.1

0.36

1.7

73.37

36.9

Associated Gene:

Gene:

PLA2R1

Ensembl Gene ID:

ENSAPLG00000006239

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047888

20622424 - 20660194

37771

ENSAPLT00000006562

20622424 - 20662599

40176