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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20694242_20694789_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20694242 - 20694789

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTAAATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTATTTTAAAT

Flanking Amino Acid:

DAIMQAAVCKEKIGWRNDSL

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.5

28.5

Major BPS

90.4

0.7

90.2

19.3

Major PPT

81.4

0.71

0.9

74.5

38.9

Minor 5ss

32.1

-2

3.1

40.5

45.7

Minor BPS

64.9

0.55

1.4

78.42

37.5

Associated Gene:

Gene:

ITGB6

Ensembl Gene ID:

ENSAPLG00000006858

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007167

20669958 - 20699560

29603