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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20735559_20736556_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

20735559 - 20736556

Intron Length:

998

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TCACCTTTGATT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

73.2

34.8

Major BPS

0.85

0.9

39.9

Major PPT

86.3

0.82

0.8

80.8

36.4

Minor 5ss

30.5

-2.2

3.8

47.1

48.5

Minor BPS

63.7

0.51

1.2

72.77

38.6

Associated Gene:

Gene:

RBMS1

Ensembl Gene ID:

ENSAPLG00000007282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030278

20735166 - 20825040

89875

ENSAPLT00000007615

20735166 - 20878956

143791