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Intron Name: Anas_platyrhynchos_platyrhynchos_7_20797672_20878881_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20797672 - 20878881

Intron Length:

81210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TTCACTCTAACA

Flanking Amino Acid:

YYYPQYLQAKQSIVPAHPMA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

60.8

0.34

1.7

72.68

39.3

Associated Gene:

Gene:

RBMS1

Ensembl Gene ID:

ENSAPLG00000007282

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007615

20735166 - 20878956

143791