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Intron Name: Anas_platyrhynchos_platyrhynchos_7_21029612_21033209_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
5UTR

Intron Coordinates:
21029612 - 21033209

Intron Length:
3598

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGCACG

5'SS Class:
major

3'SS Sequence:
GATTACTTTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
TTCTGATTACTT

Flanking Amino Acid:
5UTR

Intron Amino Acid Position:
5UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.9
0.68
1.1
66.3
45.2

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
78.2
0.64
0.9
73.9
41

Minor 5ss
38.3
-1.3
3.1
49
47

Minor BPS
48
-0
2.2
72.41
45

Associated Gene:

Gene:
TANK

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21028867 - 21054998
26132